1. Kumar Jeyaprakash, Kannan Thirumalairaj, Usha Kim, Veerappan Muthukkaruppan, Ayyasamy Vanniarajan “RB1 transcript analysis detects novel splicing aberration in Retinoblastoma” Pediatr Blood Cancer. 2023 Jun; 70(6): e30290
  2. Prakash Chermakani, Periasamy Sundaresan “Traboulsi Syndrome: A Rare Eye Disease and its Genetic Association” TNOA J Ophthalmic Sci Res 2023; 61:41-5
  3. Manojkumar Kumaran, Bharanidharan Devarajan “ eyeVarp: a computational framework for the identification of pathogenic variants specific to eye disease” Genet Med. 2023 Jul; 25(7):100862.
  4. Kuppan Gokulakrishnan, Joyappa Nikhil, Biju Viswanath, Chinnasamy Thirumoorthy Sandhya Narasimhan, Bharanidharan Devarajan, Ebin Joseph, Arul Kevin Daniel David, Sapna Sharma, Kavitha Vasudevan, Vanteemar S. Sreeraj, Bharath Holla, Venkataram Shivakumar, Monojit Debnath, Ganesan Venkatasubramanian , Shivarama Varambally  “Comparison of gut microbiome profile in patients with schizophrenia and healthy controls – A plausible non-invasive biomarker?” Journal of Psychiatric Research 2023; 162: 140-149
  5. Kadarkarai Raj Rajendran, Prakash Chermakani, Rupa Anjanamurthy, Clayton Fernando Rencilin,  Periasamy Sundaresan “Association of ABCA4 Gene Variants in Patients with Autosomal Recessive Cone-Rod Dystrophy and Retinitis Pigmentosa Cohorts from South India”  Cytology and Genetics, 2023, Vol. 57, No. 3, pp. 258–267
  6. Lakshmi Prabha Venugopalan, Vishukumar Aimanianda, Venkatesh Prajna Namperumalsamy, Lalitha Prajna, Dharmalingam Kuppamuthu, Jeya Maheshwari Jayapal “Comparative proteome analysis identifies species‑specific signature proteins in Aspergillus pathogens” Applied Microbiology and Biotechnology 2023;107, 4025–4040
  7. Sagnik Sen, Prithviraj Udaya, Jayapal Jeya Maheshwari, Piyush Kohli,  Haemoglobin Parida,  Naresh Babu Kannan, Kim Ramasamy, Kuppamuthu Dharmalingam “Comparative proteomics of proliferative diabetic retinopathy in people with Type 2 diabetes highlights the role of inflammation, visual transduction, and extracellular matrix pathways” Indian J Ophthalmol 2023;71:3069-79
  8. Sagnik Sen, Prithviraj Udaya, Jayapal J Maheshwari, Kim Ramasamy, Naresh B Kannan, Kuppamuthu Dharmalingam “Profiling of idiopathic macular hole vitreous proteome identifies the role of extracellular matrix remodelling, epithelial–mesenchymal transformation and unfolded protein‑response pathways” Indian J Ophthalmol 2023;71:2027-40.
  9. Vignesh Elamurugan, Toshit varshney, Naresh Babu K, Siddharth Narendran, Hanithraj Deivarajan, Karvannan Sevugamurthi “Crabtree Effect as a parallel pathogenetic pathway in Diabetic Retinopathy” Medical Hypotheses Volume 178, Sep 2023, 111137
  10. Mohideen Abdul Kader, Bharanidharan Devarajan, Saravanan Vijayan, Rengappa Ramakrishnan, Periasamy Sundaresan,  Mohammed Sithiq Uduman,  Subbiah R Krishnadas,  Dharmalingam Kuppamuthu, “Myocilin mutation N480K leads to early onset Juvenile and adult-onset Primary Open Angle Glaucoma in six generations of a family”  Journal of Glaucoma 2023
  11. Swathi Chadalawada, SR.Rathinam, Prajna Lalitha, Naresh Babu Kannan, Bharanidharan Devarajan “ Detection of microRNAS expression signatures in vitreous humor of intraocular tuberculosis human trabecular meshwork cells after Dexamethasone treatment” Exp Eye Res. 2023 Nov:236:109669
  12. Kandasamy Kathirvel, Xiaochen Fan, Ravinarayanan Haribalaganesh, Devarajan Bharanidharan, Rajendrababu Sharmila, Ramasamy Krishnadas, Veerappan R Muthukkaruppan, Colin E. Willoughby and Srinivasan Senthilkumari “Small RNA Sequencing Reveals a Distinct MicroRNA Signature between Glucocorticoid Responder and Glucocorticoid Non-Responder Primary Human Trabecular              Meshwork Cells after Dexamethasone Treatment” Genes 2023, 14, 2012
  13. Prakash Chermakani, Poigaialwar Gowri, Shanmugam Mahesh Kumar “Exploring Mito-Nuclear Genetic Factors In Leber’s Hereditary Optic Neuropathy: Insights From Comprehensive Profiling Of Unique Cases” EXCLI Journal 2023;22:1077-1091
  14. Swagata Ghosh, A.H.Humera Khathun, G.S.Athulya, P.Vignesh, L.Mathan, Ninad Muddaraddi, Siddharth Narendran, Prajna Lalitha, N.Venkatesh Prajna “ Host cell-type and pathogen-specific immunomodulatory functions of macrophage migration inhibitory factor (MIF) in infectious keratitis” Mol Biol Rep 2023 Dec; 50(12):10061-10072.
  15. Almar Neiteler , Anwar A. Palakkan, Kevin M. Gallagher, James A. Ross “Oxidative stress and docosahexaenoic acid injury lead to increased necroptosis and ferroptosis in retinal pigment epithelium” Scientific Reports | (2023) 13:21143
  16. Pandi Saranya, Madhu Shekhar, Aravind Haripriya, Muthukkaruppan V, Gowri Priya C “Towards the identification and characterization of putative adult human lens epithelial stem cells” Cells 2023 Nov 29;12(23):2727.
  17. Taiyab A, Belahlou Y, Wong V, Saranya P, Madhu Shekhar, Gowri Priya C, West-Mays J “Understanding the role of Yes-Associated Protein (YAP) signaling in the transformation of Lens Epithelial Cells (EMT) and Fibrosis” Biomolecules Dec 2023; 13(12):1767
  1. Divya Arunachalam, Shruthi Mahalakshmi Ramanathan, Athul Menon, Lekshmi Madhav, Gopalakrishna Ramaswamy,Venkatesh Prajna Namperumalsamy, Lalitha Prajna, Dharmalingam Kuppamuthu “Expression of immune response genes in  human corneal epithelial cells interacting with Aspergillus flavus conidia” BMC Genomics 2022;23:5
  1. Chitaranjan Mishra, Roopam Duvesh, Susmita Chowdhury, Rupa Anjanamurthy, Naresh Babu Kannan, Kim Ramasamy, Periasamy Sundaresan “Analysis of microstructural changes in an Xlinked juvenile retinoschisis patient harboring RS1  G668A mutation by enface optical coherence tomography imaging” Indian J Ophthalmol Case Rep 2022;2:136-9
  1. Mohan M, Shetty S, Perumalsamy V, Prakash C, Sundaresan P. “Clinical and genetic aspects of a child with monilethrix and visual rehabilitation” Indian J Ophthalmol Case Rep 2022;2:211-3
  1. Umadevi Subramanian , Bharanidharan Devarajan “Identification of dysregulated pathways and key genes in human retinal angiogenesis using microarray metadata” Gene Reports 26 (2022) 101434 
  1. Poigaialwar Gowri, Ponraj Sathish, Shanmugam Mahesh Kumar, Periasamy Sundaresan “Mutation profile of Neurodegenerative Mitochondriopathy – LHON in Southern India” Gene 2022 Jan 30 (Epub)
  1. Angeline Julius, Remya Rajan Renuka, Waheeta Hopper, P. Babu Raghu, Sharmila Rajendran, Senthilkumari Srinivasan, Kuppamuthu Dharmalingam,  Amer M. Alanazi,  Selvaraj Arokiyaraj, and S. Prasath  “Inhibition of Aldose Reductase by Novel Phytocompounds: A Heuristic Approach to Treating Diabetic  Retinopathy”  Evidence-Based Complementary and Alternative Medicine 2022
  1. Gurudas S, Frudd K, Maheshwari JJ, Revathy YR, Sivaprasad S, Ramanathan SM, Pooleeswaran V, Prevost AT, Karatsai E, Halim S, Chandra S, Nderitu P, Conroy D, Krishnakumar S, Parameswaran S, Dharmalingam K, Ramasamy K, Raman R, Jones C, Eleftheriadis H, Greenwood J, Turowski P. Multicenter Evaluation of Diagnostic Circulating Biomarkers to Detect Sight-Threatening Diabetic Retinopathy. JAMA Ophthalmol. 2022 May 5. [Epub] PMID: 35511139
  1. Kandasamy Kathirvel, Ravinarayanan Haribalaganesh, Ramasamy Krishnadas, Veerappan Muthukkaruppan, Colin E.Willoughby, Devarajan Bharanidharan, Srinivasan Senthilkumari “A Comparative Genome-wide Transcriptome Analysis of Glucocorticoid Responder and Non-Responder Primary Human Trabecular Meshwork Cells” Genes 2022;13:882
  1. Kandasamy Kathirvel, Lester Karen, Ravinarayanan Haribalaganesh, Ramasamy Krishnadas, Veerappan Muthukkaruppan, Brian Lane, David A.Simpson, Kasia Goljanek-Whysall, Carl Sheridan, Devarajan Bharanidharan, Colin E.Willoughby, Srinivasan Senthilkumari “Short and long-term effect of dexamethasone on the transcriptome profile or primary human trabecular meshwork cells in vitro” Sci Rep 2022 May 18; 12(1):8299
  1. Lavanya Kalaimani, Bharanidharan Devarajan, Venkatesh Prajna Namperumalsamy, Muthukkaruppan Veerappan, Julie T. Daniels, Gowri Priya Chidambaranathan “Hsa-miR-143-3p inhibits Wnt-β-catenin and MAPK signaling in human corneal epithelial stem cells” Scientific Reports 2022 Jul 6; 12(1): 11432
  1. Linda Maria Genoveva De Piedade Sequeira, Gowri Poigaialwar , Shashikant Shetty, P Sundaresan, P Vijayalakshmi “A new entity of hypomyelination with atrophy of basal ganglia and cerebellumlike syndrome with bilateral developmental cataract” Indian J Ophthalmol 2022;70:2625-6.
  1. Roopam Duvesh, Krishnadas SR, Sundaresan P “Genetics of Congenital Glaucoma” Nema HV, Nema N editors . Genetics of ocular diseases Springer Nature Singapore 2022
  1. Lavanya Kalaimani, Bharanidharan Devarajan, Venkatesh Prajna Namperumalsamy, Muthukkaruppan Veerappan, Julie T. Daniels, Gowri Priya Chidambaranathan “Hsa-miR-150-5p inhibits Wnt-β-catenin signaling in human corneal epithelial stem cells” Molecular Vision 2022; 28:178-191
  1. Durga Murugan, Sindhura Devi Adsumilli, Namperumalsamy Venkatesh Prajna,   Periasamy   Sundaresan  “Molecular Genetics and Clinical Aspects of Macular Corneal Dystrophy” Advances in Vision Research – Vol:III :Genetic eye research around Globe (2021) pp 289-302
  2. Arunachalam D, Namperumalsamy VP, Prajna L, Kuppamuthu Dharmalingam. Human Corneal Epithelial Cells Internalize Aspergillus flavus Spores by Actin-Mediated Endocytosis. Infect Immun. 2021;89.
  3. Haneef A, GiridharaGopalan RO, Rajendran DT, Nunes J, Kuppamuthu Dharmalingam, Radhakrishnan N, et al. Chemical Cross-Linking of Corneal Tissue to Reduce Progression of Loss of Sight in Patients With Keratoconus. Transl Vis Sci Technol. 2021;10:6.
  4. Hari balaganesh R, Gowri Priya C, Sharmila R, Krishnadas S, Muthukkaruppan V, Willoughby CE, et al. Assessment of differential intraocular pressure response to dexamethasone treatment in perfusion cultured Indian cadaveric eyes. Sci Rep. 2021;11:605.
  5. Hazarika M, Prajna NV, Senthilkumari S. Drug reservoir function of voriconazole impregnated human amniotic membrane: An in vitro study. Indian J Ophthalmol. 2021;69:1068-72.
  6. Sen S, Kannan SK, Shanmugam U, Rajan R, Babu N, Vanniarajan A. Variable phenotypes of gyrate atrophy in siblings with a nonsense mutation in OAT gene. Ophthalmic Genet. 2021;42:300-03.
  7. Shanthini T, Balaji S, Kim U, Muthukkaruppan V, Vanniarajan A. Genetic characterization of a patient with an unusual presentation of Waardenburg syndrome Type 4 and retinoblastoma. Pediatr Blood Cancer. 2021;68:e28553.
  8. Soundara Pandi SP, Rajendran A, Radha Krishnan S, Anto MJ, Gardiner T, Chakravarthy U, et al. Characterization of age-related macular degeneration in Indian donor eyes. Indian J Ophthalmol. 2021;69:642-46.
  9. Thundikandy R, Priya Chidambaranathan G, Radhakrishnan N, Sr R. In Vivo Confocal Microscopic Evaluation of the Limbus and Cornea in Vogt KoyanagiHaradas Syndrome. OculImmunolInflamm. 2021:1-8.
  10. Viswarubhiny S, Anjanamurthy R, Vanniarajan A, Bharanidharan D, Perumalsamy V, Sundaresan P. Clinical exome sequencing facilitates the understanding of genetic heterogeneity in Leber congenital amaurosis patients with variable phenotype in southern India. Eye Vis (Lond). 2021;8:20.
  11. Wong SSW, Venugopalan LP, Beaussart A, Karnam A, Mohammed MRS, Jayapal JM, et al. Species-Specific Immunological Reactivities Depend on the Cell-Wall Organization of the Two Aspergillus, Aspergillus fumigatus and A. flavus. Front Cell Infect Microbiol. 2021;11:643312.
  12. Zhu X, Yang M, Zhao P, Li S, Zhang L, Huang L, et al. Catenin alpha 1 mutations cause familial exudative vitreoretinopathy by over activating Norrin/beta-catenin signaling. J Clin Invest. 2021;131.
  13. Rathinam SR, Arya LK, Siva Ganesa Karthikeyan R, Sen S. Aqueous humor cytokines and cellular profiles in pediatric ocular granulomas caused by the Trematode Fluke Procerovum sp. Ocul Immunol Inflamm. 2021 Apr 1:1-10
  14. Kumar Jeyaprakash, Thennarasu Shanthini, Usha Kim, Veerappan Muthukkaruppan, Ayyasamy Vanniarajan “Human papillomavirus in retinoblastoma: A tertiary eye care center study from South India”  Indian J Ophthalmol 2021 Aug;69(8):2111-2115
  15. Sekaran Balaji, Usha Kim, Veerappan Muthukkaruppan and Ayyasamy Vanniarajan “Emerging role of tumor microenvironment derived exosomes in therapeutic `   Resistance and metastasis through epithelial-to-mesenchymal transition” Life Sciences 280 (2021) 119750
  16. Yogapriya Sundaresan, Dr. Krishnadas Subbiah Ramasamy, Muthukkaruppan Veerappan, Gowri Priya Chidambaranathan  “Functional characterization of adult human trabecular meshwork stem cells” Experimental Cell Research 405 (2021) 112709
  17. Chen Chen, Mu Yang, Lulin Huang, Rulian Zhao, Periasamy Sundaresan, Xianjun Zhu, Shujin Li, and Zhenglin Yang “Whole-Exome Sequencing Reveals Novel TSPAN12 Variants in Autosomal Dominant Familial Exudative Vitreoretinopathy” Genetic testing and Molecular biomarkers 2021;25(6): 399-404
  18. Rajapandian Siva Ganesa Karthikeyan, Gunasekaran Rameshkumar, Chidambaranathan Gowri Priya, Prajna Lalitha, Ramamoorthi Devi, Mani Iswarya, Ravilla D. Ravindran “Seroprevalence of SARS-CoV-2 specific IgG antibodies among eye care workers in South India”  Indian Journal of Medical Microbiology 39 (2021) 467–472
  19. Mohd Hussain Shah, Manojkumar Kumaran, Prakash Chermakani, Mohideen Abdul Kader, R Ramakrishnan, Subbiah R Krishnadas, Bharanidharan Devarajan, Periasamy Sundaresan “Whole exome sequencing identifies multiple pathogenic variants in a large South Indian family with primary open angle glaucoma” Indian Journal of Ophthalmology 2021; 69(9), 2461–2468
  20. Kandasamy Kathirvel, O.Rudhraa, Siva Ganesa Karthikeyan Rajapandian, Namperumalsamy Venkatesh Prajna, Prajna Lalitha, Bharanidharan Devarajan “Characterization of antibiotic resistance and virulence genes of ocular methicillin resistant staphylococcus aureus strains through complete genome analysis” Exp Eye Res. 2021 Nov; 212 (11)
  21. Swathi Chadalawada, Kandasamy Kathirvel, Prajna Lalitha, S.R. Rathinam, Bharanidharan Devarajan “Dysregulated expression of microRNAs in aqueous humor from intraocular tuberculosis patients” Mol Biol. Rep 2022 Jan;49(1):97-107
  22. Susmita Chowdhury, Roopam Duvesh, Manojkumar Kumaran, Rupa Anjanamurthy, Jayant Kumar, Ayyasamy Vanniarajan, Bharanidharan Devarajan, Periasamy Sundaresan  “Clinical reassessments and whole-exome sequencing uncover novel BEST1 mutation associated with bestrophinopathy phenotype” Ophthalmic Genet.2021 Nov 9; 1-10 (Epub)
  23. Manojkumar Kumaran, Bharanidharan Devarajan “Bioinformatics for whole exome Studies” Forero DA, editor. Bioinformatics and Human Genomics Research. New York: CRC Press, Taylor & Francis Group 2021
  24. Rajendrababu S, Pallamparthy S, Arunachalam A, Uduman MS, Srinivasan S, Krishnadas SR, Senthilkumar VA. Incidence and risk factors for postoperative intraocular pressure response to topical prednisolone eye drops in patients undergoing phacoemulsification. Int Ophthalmol.2021 Dec; 41(12):3999-4007.
  25. Meghana Tanwar, Sekaran Balaji, Ayyasamy Vanniarajan, Usha Kim, Gunja Chowdhury “Parental age and retinoblastoma – a retrospective study of demographic data and genetic analysis” Eye 2022;36:57-63
  26. Yogapriya Sundaresan, Lakshmi Priya Manivannan, Shanthi Radhakrishnan,Krishnadas Subbiah Ramasamy, Muthukkaruppan Veerappan, Gowri Priya Chidambaranathan “Reduction in trabecular meshwork stem cell content in donor eyes with primary open angle glaucoma”  Scientific Reports (2021) 11:24518
  27. Li S, Yang M, He Y, Jiang X, Zhao R, Liu W, Huang L, Shi Y, Li X, Sun K, Yang Y, Sundaresan P, Zhao P,Yang Z, Zhu X. Variants in Wnt co-recptor LRP6 are associated with familial exudative vitreoretinopathy. J Genet Genomics. 2021 Dec.9:S1673-8527 (21)00363-5.
  1. Ashwinbalaji S, Haribalaganesh R, Krishnadas S, Muthukkaruppan V, Senthilkumari S. SB772077B (SB77) Alleviated the Aqueous Outflow Resistance Mediated by Cyclic Mechanical Stress in Perfused Human Cadaveric Eyes. Sci Rep. 2020;10:10202.
  2. Balaji S, Santhi R, Kim U, Muthukkaruppan V, Priya CG, Vanniarajan A. Cancer Stem Cells with Over expression of Neuronal Markers Enhance Chemoresistance and Invasion in Retinoblastoma. Curr Cancer Drug Targets. 2020;20:710-19.
  3. Balaji S, Vanniarajan A. Implication of Pseudo Reference Genes in Normalization of Data from Reverse Transcription-Quantitative PCR. Gene. 2020;757:144948.
  4. Kalaimani L, Devarajan B, Subramanian U, Ayyasamy V, Namperumalsamy VP, Veerappan M, et al. MicroRNA Profiling of Highly Enriched Human Corneal Epithelial Stem Cells by Small RNA Sequencing. Sci Rep. 2020;10:7418.
  5. Kandasamy K, Thirumalmuthu K, Prajna NV, Lalitha P, Mohankumar V, Devarajan B. Comparative genomics of ocular Pseudomonas aeruginosa strains from keratitis patients with different clinical outcomes. Genomics. 2020;112:4769-76.
  6. Raj RK, Dhoble P, Anjanamurthy R, Chermakani P, Kumaran M, Devarajan B, Sundaresan P, Genetic characterization of Stargardt clinical phenotype in South Indian patients using sanger and targeted sequencing. Eye Vis (Lond). 2020;7:3.
  7. Rathinam SR, Chidambaranathan GP. Corneal melt in leptospirosis. Indian J Ophthalmol. 2020;68:1970.
  8. Rim TH, Kawasaki R, Tham YC, Kang SW, Ruamviboonsuk P, Bikbov MM, et al. Prevalence and Pattern of Geographic Atrophy in Asia: The Asian Eye Epidemiology Consortium. Ophthalmology. 2020;127:1371-81.
  9. Shait Mohammed MR, Krishnan S, Amrathlal RS, Jayapal JM, Namperumalsamy VP, Prajna L, et al. Local Activation of the Alternative Pathway of Complement System in Mycotic Keratitis Patient Tear. Front Cell Infect Microbiol. 2020;10:205.
  10. Yonova-Doing E, Zhao W, Igo RP, Jr., Wang C, Sundaresan P, Lee KE, et al. Common variants in SOX-2 and congenital cataract genes contribute to age-related nuclear cataract. Commun Biol. 2020;3:755.
  11. Zhu X, Sun K, Huang L, Ma S, Hao F, Yang Z, et al. Identification of Novel Mutations in the FZD4 and NDP Genes in Patients with Familial Exudative Vitreoretinopathy in South India. Genet Test Mol Biomarkers. 2020;24:92-98.
  12. Poigaialwar Gowri, Shanmugam Mahesh Kumar, Ayyasamy Vanniarajan, Devarajan Bharanidharan, Periasamy Sundaresan “A hospital-based five-year prospective study on the prevalence of Leber’s hereditary optic neuropathy with genetic confirmation” Molecular Vision 2020; 26:789-796
  13. Sarah SzeWah Wong, Irene Daniel, Jean-Pierre Gangneux, Jeya Maheshwari Jayapal, Hélène Guegan, Sarah Dellière, Prajna Lalitha, Rajashri Shende, Taruna Madan, Jagadeesh Bayry, J. Iñaki Guijarro, Dharmalingam Kuppamuthu, Vishukumar Aimanianda “Differential interactions of serum and bronchoalveolar lavage complement proteins with conidia of airborne fungal pathogen Aspergillusfumigatus” Infect immune 2020 Aug 19;88(9)
  1. Ravindran RD, Sundaresan P,  Tiruvengada Krishnan, Praveen Vashist, Maraini G, Saravanan V, Usha Chakravarthy, Liam Smeeth, Dorothea Nitsch, Ian S Young, Astrid E Fletcher Genetic variants in a sodium-dependent vitamin C transporter gene and age-related cataract  Br J Ophthalmol 2019;103:1223–1227.
  2. Manojkumar Kumaran, Umadevi Subramanian, Bharanidharan Devarajan “Performance Assessment of Variant Calling Pipelines using Human Whole Exome Sequencing and Simulated data”  BMC Bioinformatics 2019 Jun 17;20(1):342.
  3. Mohammed Razeeth Shait Mohammed, Muthukumar Balamurugan, Rabbind Singh Amrathlal, Priyadharshini Kannan, Jeya Maheshwari Jayapal, Venkatesh Prajna Namperumalsamy, Lalitha Prajna, Dharmalingam Kuppamuthu “Identification of the proteoforms of surface localized Rod A of Aspergillus flavus and determination of the mechanism of proteoform generation”  Journal of Proteomics 193 (2019) 62–70
  4. Mohammed Razeeth Shait Mohammed, Muthu Kumar, Rabbind Singh Amrathlal,  Priya Kannan, Jeya Maheshwari Jayapal, Venkatesh Prajna Namperumalsamy, Lalitha Prajna,   Dharmalingam Kuppamuthu “Data set for the spore surface proteome and Hydrophobin A/RodA proteoforms of  A.flavus”  Data in Brief  2019
  5. Dharmalingam K. “Immunology of the eye”. In: Prajna NV, editor. Peyman’s principles & practice of ophthalmology. 2nd ed. 2 Vols. New Delhi: Jaypee Brothers Medical Publishers; 2019. p. 163-174.
  6. Kim R, Krishnadas R, Dharmalingam K, Jeya Maheshwari J. “Proteomics of Neurodegenerative Disorders of the Eye”. In:  Prakash G and Iwata T editor. Advances in Vision Research: genetic eye research in Asia and the Pacific Vol II. Singapore: Springer Nature . 2019 p. 393-402
  7. Dharmaraj S, Anshuman Verma, Sundaresan P, Chitra Kannabiran  “Leber Congenital Amaurosis in Asia”.  In:  Prakash G and Iwata T editor. Advances in Vision Research: genetic eye research in Asia and the Pacific Vol II. Singapore: Springer Nature 2019 p.191- 232
  8. Usha Kim, Thirumalairaj K, Aloysius Abraham, Shanthi R, Bharanidharan D, Muthukkaruppan VR, Vanniarajan A. Genetics of Retinoblastoma: Basic Research and Clinical Applications. In:  Prakash G and Iwata T editor. Advances in Vision  Research: genetic eye research in Asia and the Pacific Vol II. Singapore: Springer Nature 2019 p.313-322
  9. Prakadeeswari G, Haripriya A, Banushree R, Sundaresan P.  Genetics of Exfoliation Syndrome in Asians. In: Prakash G  and  Iwata T editor. Advances in Vision Research: genetic eye research in Asia and the Pacific Vol II. Singapore: Springer Nature 2019 p.381-392
  10. Bharanidharan D, Vanniarajan A, Sundaresan P.    Genomic Approaches to Eye Diseases:  An Asian Perspective. In:  Prakash G  and  Iwata T editor. Advances in Vision  Research: genetic eye research in Asia and the Pacific Vol II. Singapore: Springer Nature    2019 p.403-416
  11. Amit Khedekar, Bharanidharan Devarajan, Kim Ramasamy, Veerappan Muthukkaruppan “Smartphone-based application improves the detection of Retinoblastoma” Eye (Lond).  2019 Jun;33(6):896-901
  12. Velusamy Nithya, Sivakumar Rathinam, Rajapandian Siva Ganesa Karthikeyan, Prajna Lalitha. “A ten year study of prevalence, antimicrobial susceptibility pattern, and genotypic characterization of Methicillin resistant Staphylococcus aureus causing ocular infections in a tertiary eye care hospital in South India” Infection. Genetics and Evolution, 2019. 69, 203-210.
  13. Kannan Thirumalmuthu, Bharanidharan Devarajan, Lalitha Prajna and Vidyarani Mohankumar “Mechanisms of Fluoroquinolone and Aminoglycoside Resistance in Keratitis Associated Pseudomonas aeruginosa” Microbial Drug Resistance 2019 Jul/Aug; 25(6):813-823
  14. Sara SH, Prajna NV, Senthil kumari S. “Human amniotic membrane as a drug carrier – An invitro study using fortified cefazolin ophthalmic solution”. Indian J Ophthalmol 2019 Apr;67(4):472-475.
  15. Aloysius Abraham, Kannan Thirumalai Raj, Namrata Gaikwad, Veerappan Muthukkaruppan, Alia G. Reddy, Kumarasamy Thangaraj, Usha Kim, Ayyasamy Vanniarajan “Retinoblastoma discordance in families with twins” Indian Journal of Ophthalmology 2019;67(3); p436-439
  16. Bo Gong et al., “Mutant RAMP2 causes Primary Open Angle Glaucoma via the CRLR –  cAMP axis” Genet Med 2019 Oct;21(10):2345-2354
  17. Premanand Chandran, Prakash Chermakani, Prasanna Venkataraman, Siva rasanna Thilagar, Ganesh V Raman & Periasamy Sundaresan “A novel 5 bp homozygous deletion mutation in ASPH gene associates with Traboulsi syndrome” Ophthalmic Genetics 2019 Apr;40(2):185-187
  18. T Daniel Berner et al., “The protective variant rs7173049 at LOXL1 locus impacts on retinoic acid signaling 1 pathway in pseudoexfoliation syndrome” Human Molecular Genetics 2019
  19. Niranjana Parthiban, Nithya Lakshmi Sampath, Jayapal Jeya Maheshwari, Namperumalsamy Venkatesh Prajna, Prajna Lalitha, Kuppamuthu Dharmalingam “Quantitative Profiling of tear proteome reveals down regulation of Zinc alpha -2 glycoprotein in Aspergillus flavus keratitis  patients” Exp Eye Res. 2019 (Jun 21) E pub
  20. Yogapriya Sundaresan , Ganesh Govardhan Gaikwad, Kishan Anilkumar Prajapati, N Venkatesh Prajna, Gowri Priya Chidambaranathan Comparison of structural integrity and functional status of corneal endothelium stored in Cornisol  and OptisolGS” Indian Journal of Ophthalmology 2019 Oct;67(10):1579-1584.
  21. Yogapriya Sundaresan, Muthukkaruppan Veerappan, Krishnadas Subbiah Ramasamy, Gowri Priya Chidambaranathan “Identification, quantification and age related changes of human trabecular meshwork stem cells  Eye and Vision (2019) 6:31
  22. Sivakumar Rathinam, Irene Daniel, Dharmalingam Kuppamuthu & Jeya Maheshwari Jayapal “Molecular Mimicry between Betaine Aldehyde Dehydrogenase of Leptospira and Retinal Dehydrogenase 1 of Human Lens: A Potential Trigger for Cataract Formation in Leptospiral Uveitis Patients” Ocular Immunology and Inflammation 2019 e pub
  1. Anand Rajendran; Pankaja Dhoble; Sundaresan P; Saravanan V; Praveen Vashist;  Dorothea Nitsch; Liam Smeeth;  Usha Chakravarthy;  Ravilla D Ravindran;  Astrid E Fletcher. Genetic risk factors for late age-related macular degeneration in India British Journal of ophthalmology 2018 Sep;102(9):1213-1217.
  2. Kotnala A., Senthilkumari S., Halder N., Kumar A. Velpandian T. “Microwave assisted synthesis for A2E and development of LC-ESI–MS method for quantification of ocular bisretinoids in human retina” Journal of Chromatography B 1073 (2018) 10–18
  3. Nongpiur ME, Cheng CY, Duvesh R, Vijayan S, Baskaran M, Khor CC, Allen J, Kavitha S, Venkatesh R, Goh D, Husain R, Boey PY, Quek D, Ho CL, Wong TT, Perera S, Wong TY, Krishnadas SR, Sundaresan P, Aung T, Vithana EN. “Evaluation of Primary Angle-Closure Glaucoma Susceptibility Loci in Patients with Early Stages of Angle-Closure Disease” Ophthalmology. 2018 May;125(5):664-670
  4. Prakadeeswari G, Haripriya A, Sundaresan P. MTHFR and MTHFD1 gene polymorphisms are not associated with pseudoexfoliation syndrome in South Indian population” Int Ophthalmol. 2018 Apr;38(2):599-606
  5. Li S, Yang M, Liu W, Liu Y, Zhang L, Yang Y, Sundaresan P, Yang Z, Zhu X. Targeted Next-Generation Sequencing Reveals Novel RP1 Mutations in Autosomal Recessive Retinitis Pigmentosa.  Genet Test Mol Biomarkers. 2018 Feb; 22(2):109-114.
  6. Raj RK, Prakadeeswari G, Vijayalakshmi P, Sundaresan P. Decoding of Tyrosinase Leads to Albinism in a Nonidentical Twin. J Clin Neonatol 2018;7:59-62.
  7. Zhou Y, Li S, Huang L, Yang Y, Zhang L, Yang M, Liu W, Kim R, Jiang Z Sundaresan P, Zhu X, Yang Z.” A splicing mutation in Aryl Hydrocarbon Receptor associated with retinitis pigmentosa:. Hum Mol Genet. 2018 May 2. [Epub]
  8. Vidyarani M, Sangeetha R, Gowri Priya C, Lalitha Prajna. ”Autophagy induced by type III secretion system toxins enhances clearance of Pseudomonas aeruginosa from human corneal epithelial cells”.  Biochem Biophys Res Commun. 2018:1-6. [Epub]
  9. Soundararajan Ashwinbalaji, Srinivasan Senthilkumari, Chidambaranathan Gowripriya, Subbaiah Krishnadas, B’ Ann T. Gabelt, Paul L. Kaufman & Veerappan Muthukkaruppan “SB772077B, A New Rho Kinase Inhibitor Enhances Aqueous Humour Outflow Facility in Human Eyes” Scientific Reports | (2018) 8:15472
  1. Yelchuri, Madhavi Latha; Madhavi, Bhagyashree; Gohil, Nilam ; Sajeev, Hitha Sara Venkatesh Prajna, N, Senthilkumari S “In Vitro Evaluation of the Drug Reservoir Function of Human Amniotic Membrane Using Moxifloxacin as a Model Drug” journal of Cornea 2017;0:1-6
  2. Prakadeeswari G, Haripriya A, Sundaresan P. “MTHFR and MTHFD1 gene polymorphisms are not associated with pseudoexfoliation syndrome in South Indian population” Int Ophthalmol. 2017 Mar 15. [Epub ahead of print]
  3. Durga M, Prajna NV, Lumbini Devi, Sundaresan P “Genetic Analysis of CHST6 Gene in Indian Families with Macular Corneal Dystrophy” Int J Gen Sci 4(1): 1-10.
  4. Mohd Hussain Shah, Noemi Tabanera, Subbaiah Ramasamy Krishnadas, Manju R. Pillai, Paola Bovolenta, Periasamy Sundaresan “Identification and characterization of variants and a novel 4 bp deletion in the regulatory region of SIX6, a risk factor for primary open-angle glaucoma” 2017 E Pub Molecular Genetics & Genomic Medicine
  5. Roopam Duvesh, Venkatesh R, Kavitha S, Pradeep Y. Ramulu, Krishnadas, SR, and Sundaresan P “Genetic Complexity of Primary Angle-Closure Glaucoma in Asians” in Advances in Vision Research, Volume I Part of the series Essentials in Ophthalmology p 291-313. ( Book Chapter)
  6. Renugadevi K, Asim Kumar Sil, Vijayalakshmi P, and Sundaresan P “Molecular Genetic Analysis and Diagnosis of Albinism Patients in India” JSM Genet Genomics 2017 4(1): 1024
  7. Tin Aung1, Mineo Ozaki, Mei Chin Lee et al “Genetic association study of exfoliation syndrome identifies a protective rare variant at LOXL1 and five new susceptibility loci” Nature Genetics 2017
  8. Boomiraj Hemadevi, Prajna NV, Srinivasan M, Sundaresan P “Genetic Perspective of Corneal Endothelial Dystrophies” journals of JSM Genet Genomics 2017
  9. Bhagya S, Lalitha P, Lalan Kumar Arya, Rathinam S. “Polymerase Chain Reaction and its Correlation with Clinical Features and Treatment Response in Tubercular Uveitis” Journal of Ocul Immunol Inflamm. 2017 Jun 30:1-8.
  10. Gowthaman G, Saumi Mathews, Karthik Srinivasan, Kim Ramasamy, Sundaresan P “Establishment of human retinal mitoscriptome gene expression signature for diabetic retinopathy using cadaver eyes” Journal of Mitochondrion E pub 2017 July
  1. Lalan Kumar Arya, Sivakumar R. Rathinam, Prajna Lalitha, Usha R. Kim, SudeepGhatani, Veena Tandon “Trematode Fluke Procerovumvariumas Cause of Ocular Inflammation in Children, South India” Emerging Infectious Diseases Vol. 22, No. 2, February 2016; 192-199
  2. Yanan Di, Lulin Huang, PeriasamySundaresan, Shujin Li, Ramasamy Kim, Bibhuti Ballav Saikia, Chao Qu, Xiong Zhu, Yu Zhou, Zhilin Jiang, Lin Zhang, Ying Lin, Dingding Zhang, Yuanfen Li, Houbin Zhang, Yibing Yin, Fang Lu, Xianjun Zhu &Zhenglin Yang “Whole-exome Sequencing Analysis Identifies Mutations in the EYS Gene in Retinitis Pigmentosa in the Indian Population” Scientific Reports | 6:19432 | DOI: 10.1038/srep19432
  3. ChieaChuenKhor et al., “Genome-wide association study identifies five new susceptibility loci for primary angle closure glaucoma” Nature Genetics (published online 4 April 2016)
  4. KarthikeyanArcotSadagopan, Renukadevi Kathirvel, Rosanne B. Keep, P. Sundaresan, Hui Huang, Arndt Rolfs, KannanParthiban& P. Vijayalakshmi “Cutaneous freckling: Possible new clinical marker for the diagnosis of Hermansky-Pudlak syndrome in Indian Asian patients with oculocutaneous albinism” Ophthalmic Genet. 2016 May 13:1-3.
  5. Zhang L, Yang Y, Li S, Tai Z, Huang L, Liu Y, Zhu X, Di Y, Qu C, Jiang Z, Li Y, Zhang G, Kim R, Sundaresan P, Yang Z, Zhu X.“Whole Exome Sequencing Analysis Identifies Mutations in LRP5 in Indian Families with Familial Exudative Vitreoretinopathy”Genet Test Mol Biomarkers. 2016 May 26. [Epub ahead of print]
  6. Mohideen Abdul Kader, PrasanthiNamburi, SarikaRamugade, R. Ramakrishnan, Subbiah R. Krishnadas, Ben R. Roos, SundaresanPeriasamy, Alan L. Robin&John H. Fingert “Clinical and genetic characterization of a large primary open angle glaucoma pedigree” Ophthalmic Genetics 2016
  7. Yin Yang, Yeming Yang, Lulin Huang, YaruZhai, Jie Li, Zhilin Jiang, Bo Gong, Hao Fang, Ramasamy Kim , Zhenglin Yang, PeriasamySundaresan, Xianjun Zhu & Yu Zhou “Whole exome sequencing identified novel CRB1 mutations in Chinese and Indian populations with autosomal recessive retinitis pigmentosa” Scientific Reports | 6:33681 | DOI: 10.1038/srep33681
  8. JeyalakshmiKandhavelu, Naveen Luke Demonte, Venkatesh Prajna Namperumalsamy, Lalitha Prajna, Chitra Thangavel, Jeya Maheshwari Jayapal,Dharmalingam Kuppamuthu “Aspergillusflavusinduced alterations in tear protein profile reveal pathogen induced host response to fungal infection” Journal of Proteomics 2016 (accepted 19th Oct 2016)
  9. Bibhuti BS, Sushil Kumar Dubey, Mahesh Kumar S, SundaresanP “Whole mitochondrial genome analysis in South Indian patients with Leber’s hereditary optic neuropathy” Journal of Mitochondrion 2016
  10. Senthilkumari S, Sharmila R, GowripriyaC, Vanniarajan A. “Epalrestat, an Aldose Reductase Inhibitor Prevents Glucose-Induced Toxicity in Human Retinal Pigment Epithelial Cells” In Vitro’ J OculPharmacolTher. (2016 E pub Nov 11)
  1. Lakshmi Priya Jeganathan, Lalitha Prajna, VidyaraniMohankumar. “Genotypic and “Phenotypic Characterization of Pseudomonas aeruginosa isolates from post-cataract endophthalmitis patients” Microbial Pathogenesis 2015; 78;67-73
  2. SivaganesaKarthikeyan R, Vareechon C , Prajna NV , Dharmalingam, K Pearlman E, and Lalitha P “IL-17 expression in peripheral blood neutrophils from fungal keratitis patients and healthy cohorts in South India” Journal of Infect Dis. 2015 Jan 1;211(1):130–4.
  3. Sundaresan P, Simpson DA, Sambare C, Duffy S, Lechner J, Dastane A, Dervan EW, Vallabh N, Chelerkar V, Deshpande M, O’Brien C, McKnight A J, Willoughby CE. “Whole-mitochondrial genome sequencing in primary open-angle glaucoma using massively parallel sequencing identifies novel and known pathogenic variants” Genet Med.2015 Apr;17(4):279–84.
  4. Selvam RM, Nithya R, Devi PN, Shree RS, Nila MV, Demonte NL, ThangavelC,Maheshwari JJ, Lalitha P, Prajna NV, Dharmalingam K. “Exoproteome of Aspergillusflavus corneal isolates and saprophytes: Identification of proteoforms of an oversecreted alkaline protease” J Proteomics. 2015;115:23-35
  5. Selvam RM, Nithya R, Devi PN, Shree RS, Nila MV, Demonte NL, ThangavelC,Maheshwari JJ, Lalitha P, Prajna NV, Dharmalingam K. “Data set for the mass spectrometry based exoproteome analysis of Aspergillusflavusisolates” Data in Brief. 2015; 2: 42-47
  6. Sushil Kumar Dubey, Mahalakshmi, PerumalsamyVijayalakshmi, PeriasamySundaresan “Mutational analysis and genotype-phenotype correlations in sporadic and familial aniridia patients from southern India” Molecular Vision 2015;21:88-97
  7. Saumi Mathews, Jaya Devi Chidambaram, ShrutiLanjewar, JeenaMascarenhas, Namperumalsamy Venkatesh Prajna, VeerappanMuthukkaruppan, Gowri Priya Chidambaranathan, “In vivo confocal microscopic analysis of normal human anterior limbalstroma” Cornea 2015;34:464–470
  8. Tin Aung et al., “A common variant mapping to CACNA1A is associated with susceptibility to Exfoliation syndrome” NATURE GENETICS 2015 Apr;47(4):387–92.
  9. Sushil K. Dubey, James F. Hejtmancik, Subbaiah R. Krishnadas, Rajendrababu Sharmila, Aravind Haripriya,PeriasamySundaresan “Evaluation of Genetic Polymorphisms in Clusterin and Tumor Necrosis Factor-Alpha Genes in South Indian Individuals with Pseudoexfoliation Syndrome” Current Eye Research, Early Online, 1–7, 2015
  10. Li Z, Allingham RR, Nakano M, Jia L, Chen Y, Ikeda Y, Mani B, Chen LJ, Kee C, Garway-Heath DF, Sripriya S, Fuse N, Abu-Amero KK, Huang C, Namburi P, Burdon K, Perera SA, Gharahkhani P, Lin Y, Ueno M, Ozaki M, Mizoguchi T, Krishnadas SR, Osman EA, Lee MC, Chan AS, Tajudin LS, Do T, Goncalves A, Reynier P, Zhang H, Bourne R, Goh D, Broadway D, Husain R, Negi AK, Su DH, Ho CL, Blanco AA, Leung CK, Wong TT, Yakub A, Liu Y, Nongpiur ME, Han JC, Hon DN, Shantha B, Zhao B, Sang J, Zhang N, Sato R, Yoshii K, Panda-Jonas S, Ashley Koch AE, Herndon LW, Moroi SE, Challa P, Foo JN, Bei JX, Zeng YX, Simmons CP, BichChau TN, Sharmila PF, Chew M, Lim B, Tam PO, Chua E, Ng XY, Yong VH, Chong YF, Meah WY, Vijayan S, Seongsoo S, Xu W, Teo YY, Cooke Bailey JN, Kang JH, Haines JL, Cheng CY, Saw SM, Tai ES; ICAARE-Glaucoma consortium; NEIGHBORHOOD consortium, Richards JE, Ritch R, Gaasterland DE, Pasquale LR, Liu J, Jonas JB, Milea D, George R, Al-Obeidan SA, Mori K, MacGregor S, Hewitt AW, Girkin CA, Zhang M, Sundaresan P,Vijaya L, Mackey DA, Wong TY, Craig JE, Sun X, Kinoshita S, Wiggs JL, Khor CC, Yang Z, Pang CP, Wang N, Hauser MA, Tashiro K, Aung T, Vithana EN. A common variant near TGFBR3 is associated with primary open angle glaucoma” Hum Mol Genet. 2015 Jul 1;24(13):3880–92.
  11. Bharanidharan Devarajan, Logambiga Prakash, Thirumalai Raj Kannan, Aloysius A Abraham, Usha Kim, VeerappanMuthukkaruppan and AyyasamyVanniarajan “Targeted next generation sequencing of RB1 gene for the molecular diagnosis of Retinoblastoma” BMC Cancer. 2015 Apr 28;15(1):320.
  12. KannanThirumalairaj, Aloysius Abraham, Bharanidharan Devarajan, NamrataGaikwad, Usha Kim,VeerappanMuthukkaruppanand AyyasamyVanniarajan “A stepwise strategy for rapid and cost-effective RB1 screening in Indian retinoblastoma patients” Journal of Human Genetics 2015; 1-6
  13. Gowri Priya Chidambaranathan, Saumi Mathews, Arun Kumar Panigrahi, JeenaMascarenhas, Venkatesh Prajna Namperumalsamy, MuthukkaruppanVeerappan, “In vivo confocal microscopic analysis of limbalstroma in limbal stem cell deficient patients” CORNEA 2015; August 26 (E Pub ahead of print)
  14. Kathryn P. Burdon, Rhys D. Fogarty, WeiyongShen, SotoodehAbhary, Georgia Kaidonis, BinoyAppukuttan, Alex W. Hewitt, Shiwani Sharma, Mark Daniell, RohanW. Essex, John H. Chang, Sonja Klebe, Stewart R. Lake, Bishwanath Pal, Alicia Jenkins, GowthamanGovindarjan, PeriasamySundaresan, Ecosse L. Lamoureux, Kim Ramasamy, Maria Pefkianaki, Philip G. Hykin, Nikolai Petrovsky, Matthew A. Brown, Mark C. Gillies, Jamie E. Craig “Genome-wide association study for sight-threatening diabetic retinopathy reveals association with genetic variation near the GRB2 gene” Diabetologia 2015; 19th July (E Pub ahead of print)
  15. Yu Zhou, Bibhuti B Saikia, Zhilin Jiang, Xiong Zhu, Yuqing Liu, Lulin Huang, Ramasamy Kim, Yin Yang, Chao Qu, Fang Hao, Bo Gong,Zhengfu Tai, LihongNiu, Zhenglin Yang, PeriasamySundaresan and Xianjun Zhu “Whole-exome sequencing reveals a novel frameshift mutation in the FAM161A gene causing autosomal recessive retinitis pigmentosa in the Indian population”Journal of J Hum Genet. 2015 Aug 6. (Epub ahead of print)
  16. Namrata G, Vanniarajan A ,Akram Husain, Jeyaram I, Thirumalairaj K Santhi,R, Muthukkaruppan V,Usha Kim Knudson’s hypothesis revisited in Indian retinoblastoma patients” Asia-Pac J ClinOncol 2015(Epub ahead of print)
  17. SrinivasanSenthilkumari, Mohan Neethu, RadhakrishnanSanthi, SubbiahRamaswami Krishnadas, VeerappanMuthukkaruppan.”Identification of glaucomatous optic nerve head changes in Indian donor eyes without clinical history” Indian J Ophthalmol 2015;63:600-5.
  18. ShirishDongare, Sharmila Rajendran, S Senthilkumari, Suresh K Gupta, RajaniMathur, RohitSaxena, SushmaSrivastava. “Genistein Alleviates high glucose induced toxicity and angiogenesis in cultured human RPE cells” Int J Pharm PharmSci, Vol 7, Issue 8, 294-298
  19. HemadeviBoomiraj, VidyaraniMohankumar, LalithaPrajna. Bharanidharan Devarajan “Human corneal microRNA expression profile in fungal keratitis” Invest Ophthalmol Vis Sci.2015;56:7939–7946.